Heymann, J. B. and Belnap, D. M.. (2007) Bsoft: image processing and molecular modeling for electron microscopy. J. Struct. Biol., 157, 3-18.

Heymann, J. B., Chagoyen, M., and Belnap, D. M.. (2005) Common conventions for interchange and archiving of three-dimensional electron microscopy information in structural biology. J. Struct. Biol. 151, 196-207; corrigendum (2006): 153, 312.

Bubeck, D., Filman, D. J., Cheng, N., Steven, A. C., Hogle, J. M., & Belnap, D. M. (2005) The structure of the poliovirus 135S cell entry intermediate at 10-Angstrom resolution reveals the location of an externalized polypeptide that binds to membranes. J. Virol. 79, 7745-7755.

Grünewald, K., Desai, P., Winkler, D. C., Heymann, J. B., Belnap, D. M., Baumeister, W., & Steven, A. C. (2003) Three-dimensional structure of Herpes Simplex Virus from cryo-electron tomography. Science, 302, 1396-1398.

Belnap, D. M., Watts, N. R., Conway, J. F., Cheng, N., Stahl, S. J., Wingfield, P. T., and Steven, A. C. (2003) Diversity of core antigen epitopes of hepatitis B virus. Proc. Natl. Acad. Sci. USA., 100, 10884-10889.

Belnap, D. M. and Steven, A. C. (2000) 'Déjà vu all over again': the similar structures of bacteriophage PRD1 and adenovirus. Trends in Microbiology, 8, 91-93.

Belnap, D. M., Filman, D. J., Trus, B. L., Cheng, N., Booy, F. P., Conway, J. F., Curry, S., Hiremath, C. N., Tsang, S. K., Steven, A. C., and Hogle, J. M. (2000). Molecular tectonic model of virus structural transitions: the putative cellentry states of poliovirus. J. Virol. 74, 1342-1354.

Belnap, D. M., McDermott, B. M., Filman, D. J., Cheng, N., Trus, B. L., Zuccola, H. J., Racaniello, V. R., Hogle, J. M., and Steven, A. C. (2000) Three-dimensional structure of poliovirus receptor bound to poliovirus. Proc. Natl. Acad. Sci. USA, 97, 73-78.

Beuron, F., Maurizi, M. R., Belnap, D. M., Kocsis, E., Booy, F. P., Kessel, M., and Steven, A. C. (1998). At sixes and sevens: characterization of the symmetry mismatch of the ClpAP chaperone-assisted protease. J. Struct. Biol., 123, 248-259.

Belnap, D. M., Olson, N. H., and Baker, T. S. (1997). A method for establishing the handedness of biological macromolecules. J. Struct. Biol. 120, 44-51.

Belnap, D. M., Olson, N. H., Cladel, N. M., Newcomb, W. W., Brown, J. C., Kreider, J. W., Christensen, N. D., and Baker, T. S. (1996). Conserved features in papillomavirus and polyomavirus capsids. J. Mol.
Biol. 259, 249-263.

Belnap, D. M., Grochulski, W. D., Olson, N. H., and Baker, T. S. (1993). Use of radial density plots to calibrate image magnification for frozen-hydrated specimens. Ultramicroscopy, 48, 347-358.